Bureaucrats, emailconfirmed, Administrators
6,041
edits
Adding compounds: Difference between revisions
no edit summary
No edit summary |
No edit summary |
||
| Line 6: | Line 6: | ||
groovy createWDitemsFromSMILES.groovy -w compoundcloud.wikibase.cloud -a P11 | groovy createWDitemsFromSMILES.groovy -w compoundcloud.wikibase.cloud -a P11 | ||
</pre> | </pre> | ||
This script starts with a plain text file with one SMILES string on each line. | |||
If you add a tab-separated label/name on the same line, you can use this command: | |||
<pre> | |||
groovy createWDitemsFromSMILES.groovy -w compoundcloud.wikibase.cloud -a P11 -l | |||
</pre> | |||
The output of the command is a file called ''output.quickstatements''. Due to a bug in the | |||
Wikibase software, the unit annotation should removed by removing the "U3" string from the | |||
file. After that, enter it via the [https://compoundcloud.wikibase.cloud/tools/quickstatements/ QuickStatements API]. | |||